Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954212.1_cds_XP_016493138.1_83278
CDS Infomation

[gene=LOC107812523] [db_xref=GeneID:107812523] [protein=26S protease regulatory subunit 8 homolog A-like] [protein_id=XP_016493138.1] [location=complement(join(6882..7022,7235..7345,7655..7753,7854..8010,9596..9759,9854..9916,10043..10267,10865..10962,12037..12232))] [gbkey=CDS]
Sequence

ATGGCGTCAGCTGATGTGGAGAAGAGCAAGAGGGAGATTGAGAGAGAGGAGAGCTGTTCG
GCAAAAGCAACGAAGCAGGGGGAAGGGCTGAGACAGTACTATATGCAGCACATCCACGAT
CTCCAGCTCCAAGTCCGCCAAAAGACTCATAATCTCAATCGCCTTGAAGCCCAGCGTAAC
GAGCTCAATTCTAAAGTGAGAATGCTCAAAGAGGAATTACAATTGCTTCAGGAGCCTGGA
TCATATGTTGGTGAAGTTGTTAAAGTAATGGGGAAGTCAAAGGTTCTTGTTAAAGTTCAT
CCTGAAGGCAAATATGTTGTTGATATTGACAAAAGTATTGACATTACGAAGATCACTCCA
TCAACTAGAGTTGCCCTGCGCAATGATAGCTATGTCCTCCATCTAATTTTACCTAGCAAA
GTAGATCCATTAGTCAACCTCATGAAAGTTGAGAAAGTGCCAGATTCCACTTATGACATG
ATTGGTGGTCTCGACCAGCAGATCAAAGAGATTAAAGAGGTTATTGAGCTTCCCATTAAG
CATCCTGAGTTGTTTGAGTCTCTTGGAATAGCTCAACCGAAGGGAGTGCTGCTCTATGGG
CCTCCAGGAACCGGGAAAACATTGTTGGCGAGGGCAGTTGCACATCACACTGATTGTACC
TTCATTAGGGTCTCTGGTTCCGAACTAGTGCAGAAATATATTGGAGAAGGTTCTCGGATG
GTGAGAGAGCTTTTTGTTATGGCCAGGGAACATGCTCCTTCCATCATTTTTATGGATGAG
ATAGACAGCATTGGATCTGCTAGGATGGAATCAGGGAGTGGCAATGGTGATAGCGAAGTG
CAGAGGACAATGCTCGAACTTCTGAATCAGCTTGATGGATTTGAGGCATCAAACAAAATT
AAGGTTCTAATGGCCACAAACCGTATAGATATTCTAGATCAAGCACTCCTTAGACCAGGA
AGGATTGACAGGAAGATTGAATTTCCAAATCCCAATGAAGAGTCTCGACAGGACATTTTG
AAGATTCATTCGAGGAAGATGAACTTGATGCGAGGGATTGATTTGAAGAAGATTGCTGAG
AAGATGAATGGTGCTTCTGGGGCTGAACTTAAGGCTGTATGTACAGAAGCAGGGATGTTT
GCTCTAAGGGAGAGAAGGGTGCACGTGACTCAAGAAGATTTTGAGATGGCTGTCGCCAAA
GTAATGAAGAAAGAGACAGAGAAGAACATGTCACTGCGAAAGCTGTGGAAGTAG

Peptide Sequence

PEP ID

XP_016493138.1
PEP Infomation

PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana tabacum]
Sequence

MASADVEKSKREIEREESCSAKATKQGEGLRQYYMQHIHDLQLQVRQKTHNLNRLEAQRN
ELNSKVRMLKEELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKITP
STRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIK
HPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRM
VRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKI
KVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRQDILKIHSRKMNLMRGIDLKKIAE
KMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMSLRKLWK

Transcript Sequence

Gene sequence data has not been registered.